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mcp-server-BioRxiv

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Overview

The mcp-server-BioRxiv is a project aimed at providing a server infrastructure for managing and sharing biological research data, specifically tailored for the BioRxiv platform.

To use the mcp-server-BioRxiv, clone the repository from GitHub, set up the server environment, and follow the documentation provided in the repository to configure and deploy the server.

  • Server infrastructure for biological data management - Integration with BioRxiv for seamless data sharing - Support for various biological data formats
  1. Hosting biological datasets for research collaboration.
  2. Enabling researchers to share their findings on BioRxiv.
  3. Providing a platform for data analysis and visualization in biological research.

Add to your AI client

Use these steps to connect mcp-server-BioRxiv in Cursor, Claude, VS Code, and other MCP-compatible apps. The same JSON appears in the Use with menu above for one-click copy.

Cursor

Add this to your .cursor/mcp.json file in your project root, then restart Cursor.

.cursor/mcp.json

{
  "mcpServers": {
    "mcp-server-biorxiv-jackkuo666": {
      "command": "npx",
      "args": [
        "-y",
        "@modelcontextprotocol/server-mcp-server-biorxiv-jackkuo666"
      ]
    }
  }
}

Claude Desktop

Add this server entry to the mcpServers object in your Claude Desktop config, then restart the app.

~/Library/Application Support/Claude/claude_desktop_config.json (macOS) or %APPDATA%\Claude\claude_desktop_config.json (Windows)

{
  "mcpServers": {
    "mcp-server-biorxiv-jackkuo666": {
      "command": "npx",
      "args": [
        "-y",
        "@modelcontextprotocol/server-mcp-server-biorxiv-jackkuo666"
      ]
    }
  }
}

Claude Code

Add this to your project's .mcp.json file. Claude Code will detect it automatically.

.mcp.json (project root)

{
  "mcpServers": {
    "mcp-server-biorxiv-jackkuo666": {
      "command": "npx",
      "args": [
        "-y",
        "@modelcontextprotocol/server-mcp-server-biorxiv-jackkuo666"
      ]
    }
  }
}

VS Code (Copilot)

Add this to your .vscode/mcp.json file. Requires the GitHub Copilot extension with MCP support enabled.

.vscode/mcp.json

{
  "servers": {
    "mcp-server-biorxiv-jackkuo666": {
      "type": "stdio",
      "command": "npx",
      "args": [
        "-y",
        "@modelcontextprotocol/server-mcp-server-biorxiv-jackkuo666"
      ]
    }
  }
}

Windsurf

Add this to your Windsurf MCP config file, then restart Windsurf.

~/.codeium/windsurf/mcp_config.json

{
  "mcpServers": {
    "mcp-server-biorxiv-jackkuo666": {
      "command": "npx",
      "args": [
        "-y",
        "@modelcontextprotocol/server-mcp-server-biorxiv-jackkuo666"
      ]
    }
  }
}

Cline

Open Cline settings, navigate to MCP Servers, and add this server configuration.

Cline MCP Settings (via UI)

{
  "mcpServers": {
    "mcp-server-biorxiv-jackkuo666": {
      "command": "npx",
      "args": [
        "-y",
        "@modelcontextprotocol/server-mcp-server-biorxiv-jackkuo666"
      ]
    }
  }
}

FAQ

What is the purpose of mcp-server-BioRxiv?

The purpose is to facilitate the management and sharing of biological research data on the BioRxiv platform.

Is there any documentation available?

Yes! Comprehensive documentation is available in the GitHub repository.

Can I contribute to the project?

Absolutely! Contributions are welcome, and you can find guidelines in the repository.7:["$","div",null,{"className":"container mx-auto flex flex-col gap-4","children":["$L26","$L27",["$","$L28",null,{"currentProject":{"id":2854,"uuid":"e5a25111-9d67-456c-9394-2904354e6324","name":"mcp-server-BioRxiv","title":"mcp-server-BioRxiv","description":"","avatar_url":"https://avatars.githubusercontent.com/u/41313632?v=4","created_at":"2025-03-15T10:01:48.148Z","updated_at":"2025-03-15T12:02:05.221Z","status":"created","author_name":"JackKuo666","author_avatar_url":"https://avatars.githubusercontent.com/u/41313632?v=4","tags":"[]","category":"research-and-data","is_featured":false,"sort":1,"url":"https://github.com/JackKuo666/mcp-server-BioRxiv","target":"_self","content":"# mcp-server-BioRxiv","summary":"$29","img_url":null,"type":null,"metadata":"{\"star\":\"0\",\"license\":\"\",\"language\":null,\"is_official\":false,\"latest_commit_time\":\"2025-03-15 17:42:57\"}","user_uuid":null,"tools":null,"sse_url":null,"sse_provider":null,"sse_params":null,"is_official":false,"server_command":null,"server_params":null,"server_config":null,"allow_call":false,"is_innovation":false,"is_dxt":false,"dxt_manifest":null,"dxt_file_url":null,"is_audit":false},"randomProjects":[],"currentServerKey":"$undefined"}]]}]

Research and data